PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007411.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 270aa    MW: 30375.2 Da    PI: 6.4323
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007411.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.0005997119123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            y+C+ C+++F++   L  H  +H
  Cse_sc007411.1_g010.1  97 YECKTCNRTFPSFQALGGHRASH 119
                            99**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEIELQFTEN MIRGKRTKRP RPCSPLFDSG NGEHCLASTL SEEDEDMANC LILLAQSVCV  60
SPIIKEEKTD PIRYKTEKLN SRKLTDITSG NKSYYVYECK TCNRTFPSFQ ALGGHRASHK  120
KPKLNTEEKE LESMVSLETH DQNNDNYEKS PSPDLSPARA QIRISVHDHS KEHSNKSKVH  180
ECSICGSEFL SGQALGGHMR KHRPIQLPIN RAATSSIDDD KSGDNLDHNG VFSLDLNLPP  240
PEMMEDIVVQ SKFESFKSMF SSPALVDCPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11822KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.17e-48C2H2 family protein