PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007260.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 460aa MW: 53520.8 Da PI: 9.9574

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007260.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.4	5e-23	190	295	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 +fY+eYA+e GF+vr+ +kk+k+++ t + fvCs+eg + k++ ++ +rr+ra++r+gCka l+++ ++ Cse_sc007260.1_g030.1 190 NFYKEYAREGGFEVRRGGQKKRKTKEDPTLKYFVCSREGVKPAPKSDkkaadtsksdniqivkQVIRRRRRASQRCGCKALLRLRHTE 277 6************************************98877766789*******99889999*************** PP FAR1 73 dgkwevtkleleHnHela 90 d+k++v+++ ++HnH+l+ Cse_sc007260.1_g030.1 278 DNKYVVYTFFEKHNHPLV 295 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MDILNCFVEV WKITTLYDLE TQICKSEGVR KFEELKLGPL IRHPLIILYF SVKSDSTRAF 60 RISGQEVISF LVNFMDTNKR IEVKGDELLD FIAKKRSVDS KEKLHVRIQS LGYVFASPLK 120 SEILVVLFAG QIESPPSCNI VQDDIVVDDQ SVPLVGSYQR TPPGSKFWIP EAKNKPVEGT 180 LFDTIDLALN FYKEYAREGG FEVRRGGQKK RKTKEDPTLK YFVCSREGVK PAPKSDKKAA 240 DTSKSDNIQI VKQVIRRRRR ASQRCGCKAL LRLRHTEDNK YVVYTFFEKH NHPLVQENDY 300 KYLRAARKLS FPKQQLLYQL SNANLGPKKA WKVFKEMFGG FENIGFTDVE CRNYRRGLNM 360 FIGERDAQMV VEKLLSRKEF SDFSIEYKQD KKTKSLVGLF WADEQAKRHY AAFGDVVSFD 420 ATFRSNRFDA KFIFILVIYL FIITFIHHLL LHTRYHVYNN

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MDILNCFVEV WKITTLYDLE TQICKSEGVR KFEELKLGPL IRHPLIILYF SVKSDSTRAF  60
RISGQEVISF LVNFMDTNKR IEVKGDELLD FIAKKRSVDS KEKLHVRIQS LGYVFASPLK  120
SEILVVLFAG QIESPPSCNI VQDDIVVDDQ SVPLVGSYQR TPPGSKFWIP EAKNKPVEGT  180
LFDTIDLALN FYKEYAREGG FEVRRGGQKK RKTKEDPTLK YFVCSREGVK PAPKSDKKAA  240
DTSKSDNIQI VKQVIRRRRR ASQRCGCKAL LRLRHTEDNK YVVYTFFEKH NHPLVQENDY  300
KYLRAARKLS FPKQQLLYQL SNANLGPKKA WKVFKEMFGG FENIGFTDVE CRNYRRGLNM  360
FIGERDAQMV VEKLLSRKEF SDFSIEYKQD KKTKSLVGLF WADEQAKRHY AAFGDVVSFD  420
ATFRSNRFDA KFIFILVIYL FIITFIHHLL LHTRYHVYNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-30	FAR1 family protein