PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007243.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 161aa MW: 17910.3 Da PI: 9.8895 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.5 | 6.3e-13 | 43 | 85 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eE + l a++ +G+ W++I+r ++ gRt++ +k+ w+ + Cse_sc007243.1_g060.1 43 AFSKEENDVLMAAHAVYGNQ-WSKISRFLP-GRTDNRIKNQWHVL 85 69****************99.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MNHNCTGGPY GRMGSSHYIS SNSGKSCRLR WVNQLDPRIK ICAFSKEEND VLMAAHAVYG 60 NQWSKISRFL PGRTDNRIKN QWHVLTARRH KNVVTRLCDH ITYLIHMPSS FPTLAGDALV 120 PDNFMDAAIA GSMRNNSNLP EALNTSGAQT QANPSNIFTP P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 1e-29 | MYB family protein |