PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007195.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 27084.6 Da PI: 8.3814 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 17 | 62 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd +l+++v+ G ++W+ I + ++ gR++k+c++rw + Cse_sc007195.1_g050.1 17 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 62 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 34.7 | 4.1e-11 | 87 | 120 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++a+ +G++ W+ I++ ++ gRt + +k++w++ Cse_sc007195.1_g050.1 87 ILRAHLIHGNK-WSVISKLLP-GRTNNAIKNHWNST 120 6899*******.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MTSSSSSNDT VNLLQKKGSW TPEEDAKLIQ LVETQGARNW SVIGSSIPGR SGKSCRLRWC 60 NQLSPNVQHR PFTPHEDDCN LVYNDVILRA HLIHGNKWSV ISKLLPGRTN NAIKNHWNST 120 LRQRGLTLTR SFGSESTQCD DNDVGLGLKN KKRRCVSVSV IVSDISSYDG MTVLTLLPLG 180 NGEKKKDGDE VEKGTVEIED TCLVDVMRKM IAKDVRSYID ELRAKDGSSF EPVLHHVPNR 240 VSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 154 | LKNKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 7e-44 | MYB family protein |