PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007159.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 207aa MW: 23814.5 Da PI: 6.7934 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.7 | 5.6e-13 | 6 | 48 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+W++eEde l ++++++G++ W +I++ + gR++ +c sr+++ Cse_sc007159.1_g050.1 6 GPWSPEEDEMLRNLIRKHGSN-WPLISKSIS-GRSGDSCWSRLLS 48 89*****************99.*********.**********986 PP | |||||||
2 | Myb_DNA-binding | 41.6 | 2.8e-13 | 52 | 92 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T+eEd l ++v+++G + W++I++ ++ g +++ c++rw+ Cse_sc007159.1_g050.1 52 SFTPEEDRMLQNLVEKHGHN-WSLISNSIP-GTSANTCRLRWL 92 79****************88.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MDQIEGPWSP EEDEMLRNLI RKHGSNWPLI SKSISGRSGD SCWSRLLSLY LSFTPEEDRM 60 LQNLVEKHGH NWSLISNSIP GTSANTCRLR WLFVHRPFTP EEDETNYEDI TISDRNYFLH 120 KVCYINRVLG KMARDNVSQL SVGMPTFKRT LFPFSGHERP QQIYTTATSE TLWNLNTNGT 180 QGNSRFHLAM ETGSQNSIHQ GNSGHEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 6e-19 | MYB family protein |