PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007159.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 151aa MW: 17720.3 Da PI: 8.0001 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.7 | 9.5e-12 | 6 | 47 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +W++eEde l ++++++ + W++++ ++ gR+ k+c srw+ Cse_sc007159.1_g030.1 6 EPWSPEEDEMLDNLFEKHRFN-WSLVSMSIP-GRSHKSCWSRWL 47 58*******************.*********.***********7 PP | |||||||
2 | Myb_DNA-binding | 40.4 | 6.6e-13 | 65 | 105 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++eEde+l ++v+++G + W++I++ + g++ + ck rw+++ Cse_sc007159.1_g030.1 65 SPEEDEILQNLVEKHGRN-WSLISKSIL-GKSVNTCKFRWLSL 105 89**************66.********9.***********976 PP | |||||||
3 | Myb_DNA-binding | 34.6 | 4.4e-11 | 109 | 150 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T+ Ed+ l ++v ++G++ W+++++ ++ + +k ck+rw+++ Cse_sc007159.1_g030.1 109 FTPKEDKMLQNLVVKHGSN-WSLVSKSIP-DKLAKTCKLRWLSL 150 9****************99.*********.9**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MDQIEEPWSP EEDEMLDNLF EKHRFNWSLV SMSIPGRSHK SCWSRWLLHD SHQKKDMDLT 60 GGPCSPEEDE ILQNLVEKHG RNWSLISKSI LGKSVNTCKF RWLSLQWSFT PKEDKMLQNL 120 VVKHGSNWSL VSKSIPDKLA KTCKLRWLSL Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 1e-17 | MYB family protein |