PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007092.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 225aa    MW: 25418.6 Da    PI: 5.5792
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007092.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12146193455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+++Er RR++i+ +++ L++l+P +    sk  +Ka+iL + + Y++ Lq
  Cse_sc007092.1_g020.1 146 SHSIAERARREKIKGKMQYLQDLVPGC----SKITNKAAILDEIITYVQCLQ 193
                            8**************************....899***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGEILKIFDQ SPQSHYQMHH HDHFQHGLEN VGSQLNGVWE SESPLSSIFN FGCSEVAENT  60
FMDFSVDGLS KVTVEVEQTQ SSRKRKLELD EVEVDSQKQS AECDSELVEP PKAKRKPCNG  120
DSKPKVDHPK TDYIHVRARR GQATDSHSIA ERARREKIKG KMQYLQDLVP GCSKITNKAA  180
ILDEIITYVQ CLQMEVEVLT MKLAATTSVE LDMNNPLPQE AMNTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.12e-38bHLH family protein