PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007068.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 331aa MW: 38138.8 Da PI: 8.1458

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007068.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.9	6.7e-18	94	200	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 ++Y eYA ++ Fs+rks+sk++ +ge+t+++ vC++ gk++++ k + +++r+++ t t+Cka+++++ Cse_sc007068.1_g030.1 94 DMYLEYALKARFSIRKSTSKRK--KGEVTHKHIVCNRAGKPRKTIVKdtlaqssqtidnqkdgvnKPRQKRNSNYTVTDCKACVRLTA 179 58*************99988..999***********9988889**********9877888899999******** PP FAR1 71 ek.dgkwevtkleleHnHela 90 + + +++++++++HnH+l Cse_sc007068.1_g030.1 180 IHgTLAFKLDEFVENHNHPLL 200 999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MNSTIGNYDQ EDISVPVVSP MQTEVNVHIK SPINDEQVNC NEDFSSEYSD LDDSESDDEC 60 VPTPKGHKYW VPEVPADEKP SEGNVFDTFD EAHDMYLEYA LKARFSIRKS TSKRKKGEVT 120 HKHIVCNRAG KPRKTIVKDT LAQSSQTIDN QKDGVNKPRQ KRNSNYTVTD CKACVRLTAI 180 HGTLAFKLDE FVENHNHPLL DKNNTDLLKA RRKLDFSDKL FIHRASLSNL GPTKAHRLRV 240 AIMGSYQKVR GKPSDWKNFH RSVNKYIGPR DAQMLIDKMN DRKKHVPNFS FEYHIVDDVL 300 SRMFWADETM KCNYNEFGDV VSFDATYRTN R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	138	KRKKGEVTHKHIVCNRAGKPRKTIVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	8e-19	FAR1 family protein