PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007067.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 487aa MW: 55504.8 Da PI: 6.9682

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007067.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45	3.6e-14	130	222	3	89
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++ g ++ + + ++k++r+++ + tgCka+++ ++ + k+++t +++ Cse_sc007067.1_g010.1 130 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNRDGCPKGIHVDtldlknSDKQKRSSNLHITGCKARVMFELIPgSTKYKLTVFDS 216 99**********998887.8898*********99888778888888899999999***********9******* PP FAR1 84 eHnHel 89 Hn e+ Cse_sc007067.1_g010.1 217 IHNREF 222 *887 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MDLIQNSSVS SDPSSSITES ATESDRSSSD PSSSITVSDD VSVTESASED VVVSDDVSAK 60 YTAEIVAYEH GDESAAIKKL NALKTPESFS THSNFDTPGG TVYYIPKVPV DVLLAKGNVF 120 NSVDECISAY MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNRDGCPKGI HVDTLDLKNS 180 DKQKRSSNLH ITGCKARVMF ELIPGSTKYK LTVFDSIHNR EFERKEYKHF SNTERQLTYA 240 EQLFIVKAAS VNICATRAHH LLTGLKGSYL LVHGTTMENR QKHVPDFSFD YLVENAELSA 300 ILWADEVSKY NYKEFCDICS KIYDHTDFKR KFNQIVWNMY IGPDEFEYQW GKLLDEFNLH 360 NHKWLTKMFR ISSCWIPAFF VDSPLCGLMR TTSRSESENS FFSHFTNSGS TLMNFMNCFE 420 MAMEKQRHIQ ERLDHKSIDS VPTLRTYLKI ERHALKVYTR PLFELVQAEI FAGTWFCQID 480 TKSLVEG

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MDLIQNSSVS SDPSSSITES ATESDRSSSD PSSSITVSDD VSVTESASED VVVSDDVSAK  60
YTAEIVAYEH GDESAAIKKL NALKTPESFS THSNFDTPGG TVYYIPKVPV DVLLAKGNVF  120
NSVDECISAY MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNRDGCPKGI HVDTLDLKNS  180
DKQKRSSNLH ITGCKARVMF ELIPGSTKYK LTVFDSIHNR EFERKEYKHF SNTERQLTYA  240
EQLFIVKAAS VNICATRAHH LLTGLKGSYL LVHGTTMENR QKHVPDFSFD YLVENAELSA  300
ILWADEVSKY NYKEFCDICS KIYDHTDFKR KFNQIVWNMY IGPDEFEYQW GKLLDEFNLH  360
NHKWLTKMFR ISSCWIPAFF VDSPLCGLMR TTSRSESENS FFSHFTNSGS TLMNFMNCFE  420
MAMEKQRHIQ ERLDHKSIDS VPTLRTYLKI ERHALKVYTR PLFELVQAEI FAGTWFCQID  480
TKSLVEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-19	FAR1 family protein