PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007054.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 322aa    MW: 37233.1 Da    PI: 10.0283
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007054.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.65.5e-152682590
                   FAR1 25 ngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                           ++ei+++++vC+keg+++ +++  +++++++r   rtgC+a+l+++ +k g+ +v+ ++  HnH+l+
  Cse_sc007054.1_g040.1  2 TNEIYRKWYVCNKEGFKSVKDDVtSVDTKKRRRDVRTGCQARLRITITKYGRLCVDFFDDTHNHDLS 68
                           5789*************9887764788999999********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MTNEIYRKWY VCNKEGFKSV KDDVTSVDTK KRRRDVRTGC QARLRITITK YGRLCVDFFD  60
DTHNHDLSTT PTKLMKHRSH GKFHRSIACK SLMLELGRSG MRPCHVKKAV NAMKPPYVAD  120
EWKEATNNLT HVTLNKSLEQ VTYSVGQLNV EKKYWRTVKF NLLNKVDVTC SCAMFETYGL  180
LCKHILYVMK KKHVETLPDQ YILPRWTLDS RYKVGNDSIG IKEINNESEV SALTLWCVHS  240
NSTKAIEQAK DCPSEITRLN TMLVKFLEDQ MSRKKSKEPE NVYEDNSVGV SQVDKMPQIS  300
IRDPVVLLRR KGRPKIAKSN LP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.15e-12FAR1 family protein