PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007023.1_g110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 351aa MW: 39840 Da PI: 8.3843 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.8e-16 | 20 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++++G+g +W + ++++g +R++k+c++rw++yl Cse_sc007023.1_g110.1 20 KGPWSPEEDAKLKDYIEKYGTGgNWIALPQKIGIKRCGKSCRLRWLNYL 68 79*******************************55************97 PP | |||||||
2 | Myb_DNA-binding | 37.5 | 5.4e-12 | 75 | 117 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Cse_sc007023.1_g110.1 75 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 117 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
HKKLRKMGRA PCCDKANVKK GPWSPEEDAK LKDYIEKYGT GGNWIALPQK IGIKRCGKSC 60 RLRWLNYLRP NIKHGGFSEE EDNIICSLYI SIGSRWSIIA AQLPGRTDND IKNYWNTRLK 120 KKLLGRRKQS HASRLSGSTQ DPKDGNGMET LSNSAIERLQ LHMQLQNLEN PNMSHGSNLT 180 MWPCKLNPIQ EKMMQNLQLL NESSNPLLMQ HVLSSSPQKV ELCGPSTNRL QQVYSLSNDM 240 LVNQMNNSMN GINIPSSSPH IPESDGIKQP SMEFQQYLAF QAEIDEFLTN KGANSVSLDQ 300 TQANEIDCFK DMDSAKDMMT WWSNEFDANS ASSNSWDSNG VVDHQQRELK Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 1e-90 | MYB family protein |