PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007023.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 328aa MW: 37001.4 Da PI: 4.5456

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007023.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7e-12	160	203	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L Cse_sc007023.1_g050.1 160 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 203 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MHQPNSQQGF LEDLLAPTSE AWSTFSSLQE LNTFDTRLFP TQQDDDLLLL PPSSSSYSNS 60 SFLELLSSSI QPSFQSPYTD ESIYSSTPCL DSFLPVNGSV SSSYDQQLFP FMAEGEDNDG 120 DEDHKDVVSH DQLPTVFNMG VNGEKKSKSK KVEGQPSKNL MAERRRRKRL NDRLSMLRSI 180 VPKISKMDRT SILGDTIDYM KELLEKIQDL KEQEVKSDVD QLELEGSFRE FNMNESQVIR 240 NPPKFDVERG NINTRIQVSC STKPGLLLST VNTVEALGLD IQQCVISCFN DFSLQASCSE 300 AQDHRSRISC EEMKQILFRN AGYGGRCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	170	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	7e-73	bHLH family protein