PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006951.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 326aa    MW: 37410.2 Da    PI: 5.4532
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006951.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1561.3e-17103198190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                            ++Y++YA+  GF+++ks ++ + ++g + ++  +C+keg +++ + +      ++k++r+++ + tgCka++++++++ +gk+++ ++
  Cse_sc006951.1_g010.1 103 EMYSTYAEAGGFQIKKSGQRLT-KSGMVQHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGCKARIRLELDQvSGKYKLVQF 189
                            58***************99888.778899***********99877777889888899999999************************* PP

                   FAR1  82 eleHnHela 90 
                              +HnH l 
  Cse_sc006951.1_g010.1 190 IPKHNHVLI 198
                            ******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MNENQNLIDV IDENNLIEVP LDAVNTTSVV DDLPDLEDDL PSVEDTTGFV EKEIEADSMK  60
SPRPTLYEHA ETPGGSIYWE PHVEGICVPE EGKYYDTIEE AIEMYSTYAE AGGFQIKKSG  120
QRLTKSGMVQ HKYIMCNKEG IPRRINIDTL DPQNSDKQKR NTTLHITGCK ARIRLELDQV  180
SGKYKLVQFI PKHNHVLIPK EYKHFTKKQR RMTQADKMFI VKAATNQIGA TRAHNFLTSL  240
KGGYEYVHGT SDDFKNHQRD INAFIGESDA EILINKMENR KMYVLNFTFQ YKVQNSELVA  300
MFWADEVAKC NYKEFGDIVS FDATFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-23FAR1 family protein