PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006931.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 344aa MW: 38763.6 Da PI: 6.5076

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006931.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.7e-15	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ + G g+W+ Iar g+ R++k+c++rw +yl Cse_sc006931.1_g040.1 32 KGLWSPEEDEKLMNYMLRNGQGCWTDIARNAGLQRCGKSCRLRWINYL 79 678*******************************************97 PP
2	Myb_DNA-binding	51	3.4e-16	85	128	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+++++ lG++ W+ Ia++++ gRt++++k++w++ Cse_sc006931.1_g040.1 85 RGAFSPQEEQLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 128 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MRKPDHIVRE KVCNNTNTNN NNNTKEMLKL RKGLWSPEED EKLMNYMLRN GQGCWTDIAR 60 NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEQLIIHLH SILGNRWSQI AARLPGRTDN 120 EIKNFWNSTI KKRLKVNSIS KSSPNYSTDN TSSDPCTDIM EGGMFMSMHD HDLMAICMES 180 SLTSTTTTSS SSMHNSSMIM KDRDDHFGIF PPFHQNSITR DANAASSLFN VSPCIGEIGI 240 GGDRAGYGDC GILEVPYMMG MESDNNKVAS RVTDGDANAN PTSYMFEKKS PNFNNHFNAD 300 IDGKVKVEEV VGYENHWPGE SLKMGEWDIE GLLANIPSLP YLDF

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MRKPDHIVRE KVCNNTNTNN NNNTKEMLKL RKGLWSPEED EKLMNYMLRN GQGCWTDIAR  60
NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEQLIIHLH SILGNRWSQI AARLPGRTDN  120
EIKNFWNSTI KKRLKVNSIS KSSPNYSTDN TSSDPCTDIM EGGMFMSMHD HDLMAICMES  180
SLTSTTTTSS SSMHNSSMIM KDRDDHFGIF PPFHQNSITR DANAASSLFN VSPCIGEIGI  240
GGDRAGYGDC GILEVPYMMG MESDNNKVAS RVTDGDANAN PTSYMFEKKS PNFNNHFNAD  300
IDGKVKVEEV VGYENHWPGE SLKMGEWDIE GLLANIPSLP YLDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	8e-68	MYB family protein