PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006912.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 350aa MW: 39457.9 Da PI: 7.5578

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006912.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.8	4.9e-33	216	271	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Cse_sc006912.1_g050.1 216 KQRRCWSPELHRRFVNALQQLGGSKVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 271 79****************************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	218	269	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ Cse_sc006912.1_g050.1 218 RRCWSPELHRRFVNALQQLGGSkvaTPKQIRELMQvDGLTNDEVKSHLQKYR 269 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGAQDLSLDL NPVFIPTTIS QFLGDLMNMN SVTEKILAVD DYVHRLETEI IKIHAFEREL 60 PLCKLLMNDA IVALKEELMV FRRSVKAPVI EEFIPIKKRC DDEVSKFESD IGDKKNWLSS 120 TQLCTNPKQS LEQVVKKRSE ERDVMVNKFI PFKEDMPVPG LSLISPGIKN PMRGNAYLAK 180 NGASDKLVSY TIRDVQSDIQ IGGMKSQPTL QPTSRKQRRC WSPELHRRFV NALQQLGGSK 240 VATPKQIREL MQVDGLTNDE VKSHLQKYRL HNKRFPSGVT SGASWAQSHD HYLEKHSNSQ 300 SGSPDGPLLN YTNGGTSTTG GDSMDDCEDE RSENNCWKGH LYTSGKETYV

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGAQDLSLDL NPVFIPTTIS QFLGDLMNMN SVTEKILAVD DYVHRLETEI IKIHAFEREL  60
PLCKLLMNDA IVALKEELMV FRRSVKAPVI EEFIPIKKRC DDEVSKFESD IGDKKNWLSS  120
TQLCTNPKQS LEQVVKKRSE ERDVMVNKFI PFKEDMPVPG LSLISPGIKN PMRGNAYLAK  180
NGASDKLVSY TIRDVQSDIQ IGGMKSQPTL QPTSRKQRRC WSPELHRRFV NALQQLGGSK  240
VATPKQIREL MQVDGLTNDE VKSHLQKYRL HNKRFPSGVT SGASWAQSHD HYLEKHSNSQ  300
SGSPDGPLLN YTNGGTSTTG GDSMDDCEDE RSENNCWKGH LYTSGKETYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-51	G2-like family protein