PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006826.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 634aa MW: 71826.7 Da PI: 5.5113

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006826.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52	1.2e-16	242	292	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t+ ql++Le+ ++ ++ ps+e r eL+k+lgL+++q ++WF+NrR kek+ Cse_sc006826.1_g030.1 242 KTAFQLRVLEKTYAGEQWPSEELRGELSKQLGLSDSQLRMWFCNRRLKEKN 292 5889*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MEESLKVGQL VEIKTFQQGF RGAWFRTKVL DVDLKKNKIK LDYYDFQQEI TWTKIYEVPP 60 HARRSSDSSL KKKQLMLRPQ YPLLYHKSEL PPVNSISEIC VVIDGAWKVG DMVDWYKDDV 120 YWSARVIKVL SNDKVQLELP MPPAGEGSVG DILVAFCKDL RPSLDWSQRN GWTLPTMDGQ 180 TSSGARLIFP SKQGMTSQRE EVEHAGDSPL NAFSTGRILE PIDTTVFEDA PFLLRPWSKK 240 MKTAFQLRVL EKTYAGEQWP SEELRGELSK QLGLSDSQLR MWFCNRRLKE KNSPRRSKKL 300 ISSPRGVSRA GSDALEKAGG FNLKVGQLAE MKTFEEGFRG AWFRCKVKDI DLKKNKIKLE 360 YYDFEEEIQW TNIYEAPPHA RKSSLKKKQL MLRPQYPLLY HKSEVPPVNS LSEICVVIDG 420 AWKVGDMVDW DKDDCFWSAR IIELQLPMPP AGEGSDDILI AFCKDLRPSL EWSQRKGWAL 480 PTMDGETASG AQLIFPSKQG MTSQREEVEH AAAAGDDSPL NASSTTGTGM GISVNSSAER 540 QISEPMDIAV FEDVKADDIE STDSISSMHV QESRVAAAEE DVDYSVDLNI MHEDTLEAPL 600 LDLEELANKI KWIKSILHSH RPPSNDGTCW KFSS

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MEESLKVGQL VEIKTFQQGF RGAWFRTKVL DVDLKKNKIK LDYYDFQQEI TWTKIYEVPP  60
HARRSSDSSL KKKQLMLRPQ YPLLYHKSEL PPVNSISEIC VVIDGAWKVG DMVDWYKDDV  120
YWSARVIKVL SNDKVQLELP MPPAGEGSVG DILVAFCKDL RPSLDWSQRN GWTLPTMDGQ  180
TSSGARLIFP SKQGMTSQRE EVEHAGDSPL NAFSTGRILE PIDTTVFEDA PFLLRPWSKK  240
MKTAFQLRVL EKTYAGEQWP SEELRGELSK QLGLSDSQLR MWFCNRRLKE KNSPRRSKKL  300
ISSPRGVSRA GSDALEKAGG FNLKVGQLAE MKTFEEGFRG AWFRCKVKDI DLKKNKIKLE  360
YYDFEEEIQW TNIYEAPPHA RKSSLKKKQL MLRPQYPLLY HKSEVPPVNS LSEICVVIDG  420
AWKVGDMVDW DKDDCFWSAR IIELQLPMPP AGEGSDDILI AFCKDLRPSL EWSQRKGWAL  480
PTMDGETASG AQLIFPSKQG MTSQREEVEH AAAAGDDSPL NASSTTGTGM GISVNSSAER  540
QISEPMDIAV FEDVKADDIE STDSISSMHV QESRVAAAEE DVDYSVDLNI MHEDTLEAPL  600
LDLEELANKI KWIKSILHSH RPPSNDGTCW KFSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	4e-17	HB-other family protein