PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006794.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 395aa    MW: 45476.4 Da    PI: 10.0765
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006794.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.81.7e-17138225196
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                            f+k +++s+v +  +l lp +f+++h    ++++ ++lede+g+++e  +i +++     l++GW+ F+ ++++++gD +vF+l++r+
  Cse_sc006794.1_g010.1 138 FIKSMLRSHVYSCFWLGLPQRFCKAHLP--KSTVNMVLEDEDGNEYEAVFISSRT----GLSGGWRAFALEHKIDDGDALVFELIERT 219
                            89************************53..36789***************44444....4*************************998 PP

                            EE..EEEE CS
                     B3  89 efelvvkv 96 
                            +f+  + +
  Cse_sc006794.1_g010.1 220 RFK--IYI 225
                            884..444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MAEETTTNSY EETRKQQLLE NKKRLEELGI LKMSRNLSEL SKSEKKFKPR EVKPKIRNAE  60
IVEPRRSTRA RNPIITYQDG VDIGLPNVRR RSRSDASWTS YISRPLEECR MASYEKRAQA  120
IKSAEKLQSN LQSDYPSFIK SMLRSHVYSC FWLGLPQRFC KAHLPKSTVN MVLEDEDGNE  180
YEAVFISSRT GLSGGWRAFA LEHKIDDGDA LVFELIERTR FKIYIVKAYS GSQDDDNDMS  240
DVEEEAETKK ASMAQKKRKT TLDNPAENEK TPPAKSNNQA EKTKQSKEKT SAAKSNSQDK  300
NTKKSEEIVT ATGNLMAEET ATNSYEEVRK KQLLENKKRF EELGILKIYR NLSELSKVKK  360
KSMAQRKDNP KIRNAEIVEP RRSTRARNPI STYHN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1256284KKRKTTLDNPAENEKTPPAKSNNQAEKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.16e-68B3 family protein