PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006752.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 369aa MW: 42182.5 Da PI: 5.7623

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006752.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	169	7.4e-53	10	126	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 ++e + rwl++ e++ iL+n+e+ +l +e++++p+sgsl+L+n++++r+frkDG++w++kkdgk v E+he+LKvg+ e+l+cyYah Cse_sc006752.1_g020.1 10 VQEaQFRWLRPAEVLFILQNYEETQLNHEPPQKPPSGSLFLFNKRVLRFFRKDGHNWRRKKDGKNVGEAHERLKVGNDETLNCYYAHN 97 566699******************************************************************************** PP CG-1 89 eenptfqrrcywlLeeelekivlvhylev 117 e+np+f+rrcyw+L+ ++e+ivlvhy+++ Cse_sc006752.1_g020.1 98 EDNPHFRRRCYWMLDPAMEHIVLVHYRDT 126 ************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MSGYNIKELV QEAQFRWLRP AEVLFILQNY EETQLNHEPP QKPPSGSLFL FNKRVLRFFR 60 KDGHNWRRKK DGKNVGEAHE RLKVGNDETL NCYYAHNEDN PHFRRRCYWM LDPAMEHIVL 120 VHYRDTTIGK HSAGPITAST LGSSNIIQSS NNYATQLASS AAASEFDETY NSTPGPGFLD 180 DSPGLLTNSN GASRSSLTER LDEIDSSPEL QIDEALKKIQ KQLSLEQVKD NHTFYNENEY 240 LDAFEEFQYG SDNSVSLQYP DQINISCNGA TDFGRLSQQN YSWKDVLTYD GVAAYDGSLQ 300 NYMYSSDTND VLLSQQQSDP VEELLKHHSG DTGRAFISTT KRSSGRTAEA PFWRYWYKLR 360 LVHIAISRT

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MSGYNIKELV QEAQFRWLRP AEVLFILQNY EETQLNHEPP QKPPSGSLFL FNKRVLRFFR  60
KDGHNWRRKK DGKNVGEAHE RLKVGNDETL NCYYAHNEDN PHFRRRCYWM LDPAMEHIVL  120
VHYRDTTIGK HSAGPITAST LGSSNIIQSS NNYATQLASS AAASEFDETY NSTPGPGFLD  180
DSPGLLTNSN GASRSSLTER LDEIDSSPEL QIDEALKKIQ KQLSLEQVKD NHTFYNENEY  240
LDAFEEFQYG SDNSVSLQYP DQINISCNGA TDFGRLSQQN YSWKDVLTYD GVAAYDGSLQ  300
NYMYSSDTND VLLSQQQSDP VEELLKHHSG DTGRAFISTT KRSSGRTAEA PFWRYWYKLR  360
LVHIAISRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	2e-60	CAMTA family protein