PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006722.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 388aa MW: 45238.2 Da PI: 8.8395

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006722.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.5	2.4e-09	95	167	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 +Y eYA ++ Fs+rks+sk++ +g k g +++++k+ + + t t+Cka+++ k + ++ +++++++++HnH+ Cse_sc006722.1_g010.1 95 MYLEYALKARFSIRKSTSKHK--KG---------EKDGGNKPRQKR------NFNYTVTDCKACVRFKAIHgTSSFKLYEFVENHNHP 165 899999999999999998888..22.........467888777665......89999************9************** PP FAR1 89 la 90 l Cse_sc006722.1_g010.1 166 LL 167 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MDSTTGNYDQ EDTDVPIVSP MQTEANVSIQ SPINDEQVNS NEDVSTEYSD LDDSETDDEC 60 IPTPKGHKYW ILEVPADEKP SEGNVFDTFD EAYDMYLEYA LKARFSIRKS TSKHKKGEKD 120 GGNKPRQKRN FNYTVTDCKA CVRFKAIHGT SSFKLYEFVE NHNHPLLDEK NTDLLKARRN 180 LDFSDKLFIH RVSLSNLGPT KAHRLRLAFM GGYQKVCGKP LDWKNFRRSV NKYIGPRDAQ 240 MLVDKMNDRK KHICGEVDTD FKFKKLFHKL IWNVYIEPSE FEERWHALIG KSTSKHKNCE 300 ITHKYLLCMK DTLVQGKQND DNQNDGVKKP RKKRNSNYNV TDCKACVRFK DIHGSSSYKL 360 YRFVETIITP FWMKITQIFF VSRIFIGR

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MDSTTGNYDQ EDTDVPIVSP MQTEANVSIQ SPINDEQVNS NEDVSTEYSD LDDSETDDEC  60
IPTPKGHKYW ILEVPADEKP SEGNVFDTFD EAYDMYLEYA LKARFSIRKS TSKHKKGEKD  120
GGNKPRQKRN FNYTVTDCKA CVRFKAIHGT SSFKLYEFVE NHNHPLLDEK NTDLLKARRN  180
LDFSDKLFIH RVSLSNLGPT KAHRLRLAFM GGYQKVCGKP LDWKNFRRSV NKYIGPRDAQ  240
MLVDKMNDRK KHICGEVDTD FKFKKLFHKL IWNVYIEPSE FEERWHALIG KSTSKHKNCE  300
ITHKYLLCMK DTLVQGKQND DNQNDGVKKP RKKRNSNYNV TDCKACVRFK DIHGSSSYKL  360
YRFVETIITP FWMKITQIFF VSRIFIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-10	FAR1 family protein