PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006718.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 456aa MW: 52248 Da PI: 5.5426

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006718.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97	2.8e-30	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 l pG+rF Ptd el+v+yLk+k+e+ k + + ev+i+++ P +L + ++++ e++wyf ++r++k+++g+ +nr+t+ g+Wka Cse_sc006718.1_g020.1 15 LEPGYRFCPTDPELIVYYLKPKIETGKRHPNCRYYEVNILDYSPDELTAkpEYRSCENKWYFLTPRERKHPNGDLPNRQTRdGGTWKA 102 579*******************9997774569*********84356777889****************8774789* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k ++v++ ++++vg ++ L++++ +k +kt W+mhey++ Cse_sc006718.1_g020.1 103 AIKGEPVKDVTSRVVGNRTCLAYFN---KKKHKTPWLMHEYTM 142 **********************3...33358******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MAENNQQQPD YADLLEPGYR FCPTDPELIV YYLKPKIETG KRHPNCRYYE VNILDYSPDE 60 LTAKPEYRSC ENKWYFLTPR ERKHPNGDLP NRQTRDGGTW KAAIKGEPVK DVTSRVVGNR 120 TCLAYFNKKK HKTPWLMHEY TMPDPNIPIG SQEHNKDKKK LTNWVLCKIY KKQKPNQDAN 180 NNNVGDQEAA IVEQNHLLED EPSPRRRRLL MNQEYNQWNG PQHVQIQVSN HHSGTDVQMV 240 APVQFMLTSN QESVLNNVHV RSSQTLQSTR MDTSTNLITT QPMAKFCGSD SIQPAVQDHT 300 QSFAMKQVQQ SIGSSTCEYH QNQSWPSPTQ GFKFSSGASS SSSMVLPREE DATGHVTQLD 360 DFMTLPAQAS AVQWDTNTDP MITMKQVDSS QTSSDEVLQQ HVQNSYHDTP TFYNESTMVP 420 DDEFVNHIES MFALDSEDAL SLYPPEHILR DEMDDL

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MAENNQQQPD YADLLEPGYR FCPTDPELIV YYLKPKIETG KRHPNCRYYE VNILDYSPDE  60
LTAKPEYRSC ENKWYFLTPR ERKHPNGDLP NRQTRDGGTW KAAIKGEPVK DVTSRVVGNR  120
TCLAYFNKKK HKTPWLMHEY TMPDPNIPIG SQEHNKDKKK LTNWVLCKIY KKQKPNQDAN  180
NNNVGDQEAA IVEQNHLLED EPSPRRRRLL MNQEYNQWNG PQHVQIQVSN HHSGTDVQMV  240
APVQFMLTSN QESVLNNVHV RSSQTLQSTR MDTSTNLITT QPMAKFCGSD SIQPAVQDHT  300
QSFAMKQVQQ SIGSSTCEYH QNQSWPSPTQ GFKFSSGASS SSSMVLPREE DATGHVTQLD  360
DFMTLPAQAS AVQWDTNTDP MITMKQVDSS QTSSDEVLQQ HVQNSYHDTP TFYNESTMVP  420
DDEFVNHIES MFALDSEDAL SLYPPEHILR DEMDDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	4e-30	NAC family protein