PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006698.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 304aa MW: 34266.2 Da PI: 7.1859 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.8 | 9e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++ +G+g +W + +++ g++R++k+c++rw++yl Cse_sc006698.1_g010.1 14 KGPWSPEEDTRLKEYIQTHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 33.6 | 9.1e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed+ + +++ G++ W+ a+ ++ gRt++++k++w++ Cse_sc006698.1_g010.1 69 GEFSDDEDKVICALFASIGSR-WSIMAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDTRLKEYIQ THGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGE FSDDEDKVIC ALFASIGSRW SIMAAQLPGR TDNDIKNYWN TKLKKKMMMM 120 NTIVSMPDIR KPSLYNHLQS LNTSTNYSYP SLSYFHNSNA PLSSSYNMYS PNTNSSYHDQ 180 TLSISSSPTK TVPVLQSQEH GHLGLGPMES YQGVKDSSNL VRFGGDQASC SSNSDGSGHY 240 VYDTYKEFVG SYEKEKGYYE DASLDSSLEE IKQLISTNLC SSNIDNNLNF FGDETKEVEK 300 VMYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 2e-70 | MYB family protein |