PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006688.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C3H | ||||||||
Protein Properties | Length: 164aa MW: 18620.9 Da PI: 9.3372 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.9 | 5.4e-06 | 105 | 125 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+ff r G+Ck+G+ C + H Cse_sc006688.1_g050.1 105 RICSFFIR-GECKRGAECAYRH 125 68**9999.*********9866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MPAQAPPKQK QILISARSAL APSQSSGGDL AEMQDTRKVR DTALSINSND AIPKSDVNRE 60 YFAEEHDHRA RAGLDYESSY GKVQPNDTIT KLKWTTPYYK RNQARICSFF IRGECKRGAE 120 CAYRHEIPVT GELSQQNIKD RYYGYVRSPP SHLLCTQRIV DALR |