PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006678.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 930aa MW: 107231 Da PI: 7.7224

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006678.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.6e-16	155	242	9	90
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 e+GF vr+ +++++ g +++++f Cskeg+++ + k+ +++ +r r+e rt+Cka++ v ++ +k+ v+++++eHnH Cse_sc006678.1_g050.1 155 EAGFIVRRGHQTNN--GGIVINKEFLCSKEGTKKVKVKEfdslkdncdAKSVKRIRSEFRTNCKATIYVVRS-AEKYSVKSFVEEHNH 239 69*****98887..99****************9***998999999**********999.9************ PP FAR1 88 ela 90 +++ Cse_sc006678.1_g050.1 240 AFF 242 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 930 aa Download sequence
MACCLPHSVE DKQMYVKKQC EEDDVARKDA SIDVINLFEQ AREEKQRMRE DYTICNDIIL 60 EQKAVIEKFL MDEDSKDDNI SDILWVCVQQ IQNNINTKIS DSMRQNCASN EFVEDENLSA 120 DVNVEENEEV NSPDFFTSTS MLIKPVVVKT LVPVEAGFIV RRGHQTNNGG IVINKEFLCS 180 KEGTKKVKVK EFDSLKDNCD AKSVKRIRSE FRTNCKATIY VVRSAEKYSV KSFVEEHNHA 240 FFTVEDRHLQ KSHRSMILAH QYFSIKASNL NISPCMSFNF IAELLGGYEN VGATKIDFKN 300 MSRDIYSYIG KYDAQMIIDK FSILKERDEN FTFEFKTNTD GQLIKASNLN IGPCMSFNFI 360 AELLGGYENV GATKIDFKNM SRDIYSYIGK YDAQMIIDKF SILKERDENF KFEFKTNTDG 420 QLSCLFWYNM VFVPFTGVDN HQKCVIFACG LLSKEDVVSY KWLLQAFLNT HIKEPYLVLT 480 DQDPSMLIAI PDMFKTAKHR LCIWHIMNKL PTKIGSSICE EGGFKKRLCS LVWRESDKPV 540 EFVQKWEALL DEFDLDKHKW LNYMFNIKEL WIPAYFRDIP MSGLMKTTSR SESENYFFGH 600 NSNWSSTLVH FLFHYESALD QQRNNQCVLD NNSRINTPSF KTNHLVEQHA AKFYILEAFY 660 VVQTEIVASI ESCTGSMKNL GYVKDIDKEW FGEFKVEYDE ETRSVNCSCL HFERRGRLCR 720 HAFYTHRGYG INKIPKQYLL RRWKKEVVVL PLLGSSFKAN GSSGSCISKI YSKVNAIINH 780 CGYDEEKLGI FFEKMSIFES GLESSTVAQY SGNKEDSISS MIGIPKPPAI VVFPPDIGSN 840 KGGVTGARYK PSNNDIRFKD PKECGKNLRK CRICNILTDH DFRNCPNNPD RKLLTAKKDI 900 KKSKRNGKKV KRKSNSANAE HGTEEFNFKE

Sequence ? help Back to Top

Protein Sequence Length: 930 aa Download sequence

MACCLPHSVE DKQMYVKKQC EEDDVARKDA SIDVINLFEQ AREEKQRMRE DYTICNDIIL  60
EQKAVIEKFL MDEDSKDDNI SDILWVCVQQ IQNNINTKIS DSMRQNCASN EFVEDENLSA  120
DVNVEENEEV NSPDFFTSTS MLIKPVVVKT LVPVEAGFIV RRGHQTNNGG IVINKEFLCS  180
KEGTKKVKVK EFDSLKDNCD AKSVKRIRSE FRTNCKATIY VVRSAEKYSV KSFVEEHNHA  240
FFTVEDRHLQ KSHRSMILAH QYFSIKASNL NISPCMSFNF IAELLGGYEN VGATKIDFKN  300
MSRDIYSYIG KYDAQMIIDK FSILKERDEN FTFEFKTNTD GQLIKASNLN IGPCMSFNFI  360
AELLGGYENV GATKIDFKNM SRDIYSYIGK YDAQMIIDKF SILKERDENF KFEFKTNTDG  420
QLSCLFWYNM VFVPFTGVDN HQKCVIFACG LLSKEDVVSY KWLLQAFLNT HIKEPYLVLT  480
DQDPSMLIAI PDMFKTAKHR LCIWHIMNKL PTKIGSSICE EGGFKKRLCS LVWRESDKPV  540
EFVQKWEALL DEFDLDKHKW LNYMFNIKEL WIPAYFRDIP MSGLMKTTSR SESENYFFGH  600
NSNWSSTLVH FLFHYESALD QQRNNQCVLD NNSRINTPSF KTNHLVEQHA AKFYILEAFY  660
VVQTEIVASI ESCTGSMKNL GYVKDIDKEW FGEFKVEYDE ETRSVNCSCL HFERRGRLCR  720
HAFYTHRGYG INKIPKQYLL RRWKKEVVVL PLLGSSFKAN GSSGSCISKI YSKVNAIINH  780
CGYDEEKLGI FFEKMSIFES GLESSTVAQY SGNKEDSISS MIGIPKPPAI VVFPPDIGSN  840
KGGVTGARYK PSNNDIRFKD PKECGKNLRK CRICNILTDH DFRNCPNNPD RKLLTAKKDI  900
KKSKRNGKKV KRKSNSANAE HGTEEFNFKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-46	FAR1 family protein