PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006665.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 263aa    MW: 30205.7 Da    PI: 7.9705
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006665.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.53.2e-3383139360
            ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                             vrYkeC+kNhAas+G+h++DGCgEfmp+ geegt+++lkCaAC+CHR+FHRre e e
  Cse_sc006665.1_g030.1  83 VVRYKECQKNHAASMGSHVLDGCGEFMPN-GEEGTPESLKCAACECHRSFHRREAEGE 139
                            589*************************8.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MELRENNLPQ SNQVSSSLYT YAPINTPNII PDQPHLNQRN QYHGLQQQPI SIPIPDSDPA  60
EPLVSQTPVQ WTPLDNVAVA PVVVRYKECQ KNHAASMGSH VLDGCGEFMP NGEEGTPESL  120
KCAACECHRS FHRREAEGES QSSTWVHTTH YPQPTRAATL QTPHQQHHHH RYNHHAPPMM  180
VAFGGTSSSE ETEHQPSRKR FRTKFTEQQK ERMHDFAERI GWKIQKQDDQ AIMQFCNEVG  240
LKRKVFKVWM HNSKQASKKK QHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.12e-56ZF-HD family protein