PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006613.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 328aa MW: 36059.2 Da PI: 8.46

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006613.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.9	5.6e-30	164	223	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ Cse_sc006613.1_g040.1 164 VKDGYQWRKYGQKVTRDNPSPRAYFKCSHApSCPVKKKVQRSVEDQSILVATYEGEHNHP 223 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEYTSLVDTS LDLNLNPSHF SSLVPKKEVP NNFIELGLRM SSVKDEQAAS ALVDELNRVS 60 AENKKLTEML TVMCENYNAL QNHLADYMAK NPAAPSDSTN NSSRKRKPES PTNQVMTINN 120 ERGNSESSSS DEDSCKKPRQ EQHIKAKISR VCVRTEASDT GLLVKDGYQW RKYGQKVTRD 180 NPSPRAYFKC SHAPSCPVKK KVQRSVEDQS ILVATYEGEH NHPNQSKHEQ ASSGLNRTVT 240 STTLGSASLS SSGPTITLDL TTPPKPPTNP SDEAKVGGGG DRRVDTPEFQ QFLVDQMASS 300 LTKDPSFKAA LAAAISGRMV QQNQSQKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	6e-91	WRKY family protein