PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006580.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 951aa    MW: 108191 Da    PI: 4.1303
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006580.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.58.9e-12201001595
                            -EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                     B3  15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                             l lp kf+++h  +k   k+ +l++   g sW++k++    + ++ + +GW++ vk+ gL  g+f++F+++g s f+++v 
  Cse_sc006580.1_g040.1  20 HLQLPEKFVKKHLRNK-ILKDPILKSaNGGYSWKLKMKKFDDDHTFCFVDGWSKVVKDVGLLFGEFLLFRYVGYSVFSMHVY 100
                            478*********5554.5678899994556*******76666667999************************9999988875 PP
2B342.21.5e-13213299692
                            ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                     B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                            ++s+  ++  l++p + ++  +++++e  t+tl++ +g  +++ v+   ++ks++y+ t+GWkeF ++n++ egD +vFk++ ++++ 
  Cse_sc006580.1_g040.1 213 MTSSKRNKYKLRFPPELVALTKINTKE--TITLKNDDGyeKEMPVRSDKQNKSKSYYVTEGWKEFQRSNDISEGDECVFKFITSEDKL 298
                            455566666699999999766777544..89999988877999999988999999*************************99765554 PP

                            . CS
                     B3  92 l 92 
                            +
  Cse_sc006580.1_g040.1 299 C 299
                            4 PP
3B338.32.4e-12383471694
                            ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                     B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                             +s+++++  l+++k+f++  g++  ++kt+tl++++g  ++  v+   r++  +y+l++GWkeF +  ++ +gD +vFk++ + ++f
  Cse_sc006580.1_g040.1 383 FTSSNTNQYTLSFSKDFVALAGIN--TKKTITLKNLDGyeKELPVRSHKRNRLTHYYLAAGWKEFQRNTNISDGDKFVFKFITTeDKF 468
                            5788999999********766777..45699999*99977777777766888888*************************99873444 PP

                            ..EE CS
                     B3  91 elvv 94 
                             +v 
  Cse_sc006580.1_g040.1 469 -CVA 471
                            .444 PP
4B335.91.3e-116577361190
                            HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                            + +++l+lp +f+e  g++  ++k ++++ ++g++ ++ l+   +++s ry l+ GW  F ++n++ egD +vFk++ ++++
  Cse_sc006580.1_g040.1 657 SHKSMLRLPPEFVELAGID--GKKNIKIKCPDGNERQMVLRPvkQGHSTRYCLSMGWPAFKRSNNISEGDECVFKYITSEDK 736
                            556789*******777766..44567777777777777774445999999**************************986555 PP
5B3322.2e-10832922192
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                            ff v++++ ++ks+ l+lp +f++  g++++e   +++++++ ++ ++ ++   r +  +y l+ GW  F + n++ +gD +vFk++ 
  Cse_sc006580.1_g040.1 832 FFVVTITPTNHKSK-LRLPTDFVALAGIESKE--NIIMKSLDENETQMSIRTdtRFRLTQYHLSVGWPAFKQTNNISDGDECVFKFIT 916
                            78899999999998.********666766555..5666666666666666332255666699***********************997 PP

                            SSEE.. CS
                     B3  87 rsefel 92 
                            ++++ +
  Cse_sc006580.1_g040.1 917 SEDKMC 922
                            666644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 951 aa     Download sequence    
MASRQPPFFY HILMNPSSPH LQLPEKFVKK HLRNKILKDP ILKSANGGYS WKLKMKKFDD  60
DHTFCFVDGW SKVVKDVGLL FGEFLLFRYV GYSVFSMHVY SVNGCEKILV PKVKVKVPRT  120
NKVDVSVEDE VVFDDDDDDD VEDEVEDEDD DVEYKVRDDV EEEDDDVEDD EDDDVDEDDD  180
DVEFGDDGDE DDGEDEDVDV DVDGNDGDPF FIMTSSKRNK YKLRFPPELV ALTKINTKET  240
ITLKNDDGYE KEMPVRSDKQ NKSKSYYVTE GWKEFQRSND ISEGDECVFK FITSEDKLCL  300
AKVTKKKTRS TEVHNDDMDD DDDGMDEEGK AEAAKDDFIV DGDDIFDDDG MDEEGEGEDV  360
KLVDNDDEDD SVDGDEGDPS FIFTSSNTNQ YTLSFSKDFV ALAGINTKKT ITLKNLDGYE  420
KELPVRSHKR NRLTHYYLAA GWKEFQRNTN ISDGDKFVFK FITTEDKFCV AKITKKKTRA  480
RLLPPAAEAP VTGVDDGMDE DEDVELFDHG NPSFVATITP THNHVLRMPS DFGQLAGFDT  540
KKTLTLKGLD GYEKEIPLQV DQKRYYVGKR WKDILQSTSI SEGDKCVFKF ITSEDKLCLA  600
KIIKKETQEV EFNDDDAEDD DRMDDEDVED DNDKDENDDV EPADDVDPLF VVDITTSHKS  660
MLRLPPEFVE LAGIDGKKNI KIKCPDGNER QMVLRPVKQG HSTRYCLSMG WPAFKRSNNI  720
SEGDECVFKY ITSEDKMCLE KITKKETLAT EVDDDDLKVD GIDDKDAEVN DNKVDDENVK  780
LVDDGMDDED GNGDDNKDED ENVELVDDGM DVDADDNKAE DKDVELVDGN PFFVVTITPT  840
NHKSKLRLPT DFVALAGIES KENIIMKSLD ENETQMSIRT DTRFRLTQYH LSVGWPAFKQ  900
TNNISDGDEC VFKFITSEDK MCLAKVTKEK TSARLPPLAV GTDQQKLMIM I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60142.11e-09B3 family protein