PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006552.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 470aa MW: 54161.4 Da PI: 6.7637

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006552.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	339	376	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yp+ +e+ LA+++gLt +q+ +WF N R + Cse_sc006552.1_g040.1 339 FEHflNPYPKDSEKIMLARQTGLTRSQIANWFINARVR 376 665559******************************88 PP
2	BELL	99	3.7e-32	205	276	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++lq+k +kL sll+eVd+rY+ y++qlq+v +s ++v+g+g+a++Yt+lA +iSrhFrcL+dai qi Cse_sc006552.1_g040.1 205 EKHDLQNKLTKLFSLLDEVDRRYRNYCQQLQIVEGSLDMVTGCGAARSYTALANLTISRHFRCLRDAINAQI 276 6799*****************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MATYYPNSTN HQRDVFPSSY LSNQQQQLNS YQESPCPPID MIYQNHNSTD ASYLDLLSGQ 60 TQSNRENLSR VESNQELSLS LGMQITSSMD LPSFQYGYLN HHVQGSSDHV SQSNKVENID 120 LLSFDRPMNN VQSSGTYQIP SGVVPRIYNS RFLKPSQELL DEVVNIHEAM RQLKMNRSNN 180 LHKSNENNSR IESTTSSSGE LPASEKHDLQ NKLTKLFSLL DEVDRRYRNY CQQLQIVEGS 240 LDMVTGCGAA RSYTALANLT ISRHFRCLRD AINAQIQVTR QILGDQDDSS ERVLPRLRNV 300 EKQLRQQRTL HPLGAMRHSW RPQRGLPEGS VSILRAWLFE HFLNPYPKDS EKIMLARQTG 360 LTRSQIANWF INARVRLWKP MVEDMYKEEF RDVEVNGRSS PEQTRKAAID QTSSSDDKEK 420 IMHRHTSSLV EHDTSFMNDM EVNGYAGQRH MDLADQYRFD DPQLLHDFVV

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MATYYPNSTN HQRDVFPSSY LSNQQQQLNS YQESPCPPID MIYQNHNSTD ASYLDLLSGQ  60
TQSNRENLSR VESNQELSLS LGMQITSSMD LPSFQYGYLN HHVQGSSDHV SQSNKVENID  120
LLSFDRPMNN VQSSGTYQIP SGVVPRIYNS RFLKPSQELL DEVVNIHEAM RQLKMNRSNN  180
LHKSNENNSR IESTTSSSGE LPASEKHDLQ NKLTKLFSLL DEVDRRYRNY CQQLQIVEGS  240
LDMVTGCGAA RSYTALANLT ISRHFRCLRD AINAQIQVTR QILGDQDDSS ERVLPRLRNV  300
EKQLRQQRTL HPLGAMRHSW RPQRGLPEGS VSILRAWLFE HFLNPYPKDS EKIMLARQTG  360
LTRSQIANWF INARVRLWKP MVEDMYKEEF RDVEVNGRSS PEQTRKAAID QTSSSDDKEK  420
IMHRHTSSLV EHDTSFMNDM EVNGYAGQRH MDLADQYRFD DPQLLHDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-105	TALE family protein