PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006421.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 333aa    MW: 38729 Da    PI: 7.694
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006421.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.74.4e-1496202190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 
                            ++Y+ YA +  F vrks skk   ng+  ++   C++ gk+++  ++                   +k++ ++++t t+Cka++++k 
  Cse_sc006421.1_g010.1  96 NMYKVYAAKGRFGVRKSGSKKW--NGQLAHKYVICNRGGKPRKMVETntlnedvehhvqendnvdGKKRKCRSSTTLTDCKARINLKV 181
                            58***************99988..9999**************9999899*************996666666888899*********** PP

                   FAR1  71 ek.dgkwevtkleleHnHela 90 
                             + ++ + + +++++HnH+l 
  Cse_sc006421.1_g010.1 182 IRgTNMYTLFDFVENHNHPLI 202
                            *99****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MDDIVQDWNP NPIPEDNLVV QELNDQTLLL SEQDLIMENA HHDQDDNNEA DVVDVFDLDR  60
EFIPTPNGYS YWVPNVPVDE KPKKGTLYQM FNEAVNMYKV YAAKGRFGVR KSGSKKWNGQ  120
LAHKYVICNR GGKPRKMVET NTLNEDVEHH VQENDNVDGK KRKCRSSTTL TDCKARINLK  180
VIRGTNMYTL FDFVENHNHP LIDQSNMDLS PARRKLQHDD YMFIHRASLT NIGAQKAHRL  240
RVALLGGFNK VRGMPVDWSN FRRGMNLFIG KRDAQMLVDK MMKRKEHVPQ FSFYHHTIEK  300
KLCHMYWADE TMKCNYVAFG DVVAFDATFE TNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-12FAR1 family protein