PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006396.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 37186.3 Da PI: 10.2334 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 7.8e-18 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++q+G g+W++ +++ g++R++k+c++rw +yl Cse_sc006396.1_g030.1 29 KGPWTPEEDRKLLSYIQQYGHGSWRSLPAKAGLKRCGKSCRLRWTNYL 76 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.4e-16 | 82 | 126 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ E+ + +++++lG++ W+tIa++++ +Rt++++k++w+++ Cse_sc006396.1_g030.1 82 RGKFSLKEERTITQLHALLGNR-WSTIAAHLP-RRTDNEIKNHWNSH 126 89********************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MTKSLGRNDK NKKQNSKGNI LGLGIGVKKG PWTPEEDRKL LSYIQQYGHG SWRSLPAKAG 60 LKRCGKSCRL RWTNYLRSDI KRGKFSLKEE RTITQLHALL GNRWSTIAAH LPRRTDNEIK 120 NHWNSHIKKR MTKMGIDPMT HKPKSGTQLL GTNLNHMAQW EAARLEAEAR LVQKPQNHLK 180 QLSYNHVSPQ SIHDVSKTST TLPPQNLPCL DVLKIWQGNL WSNYSINNES LQSLISRPKV 240 SVATLVMPVL NNVESNGTCG QGPTMKHNDQ IETQMGSFDE FEYANFMNDD PLRSPEFWEE 300 FVDVLDGGWN SLTNNFALMA SPPASSVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 4e-74 | MYB family protein |