PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006338.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 100aa MW: 11657.4 Da PI: 10.1425 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.3 | 1.9e-16 | 11 | 86 | 1 | 74 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdg 74 +fYn+YA++ GF+ rks+++k +++ it++ f Cskeg++ ++ + + + +r ++++rtgC+a++ +k+++++ Cse_sc006338.1_g020.1 11 EFYNNYARKNGFEPRKSSENKG-KHRVITQKYFLCSKEGQNPKTYANtliEPTGKRVTTSKRTGCEARIILKLNRNK 86 6*****************9998.6667***************9999989888899999**************99765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MLFDSLDQAF EFYNNYARKN GFEPRKSSEN KGKHRVITQK YFLCSKEGQN PKTYANTLIE 60 PTGKRVTTSK RTGCEARIIL KLNRNKCEAM QLLWSICDRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 7e-09 | FAR1 family protein |