PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006320.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CO-like

Protein Properties

Length: 362aa MW: 40815.3 Da PI: 6.1155

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006320.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.1	1.8e-08	4	48	2	40
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 e+r+C+ ++e ++l+C+ + lC +C e H+ Ht++ Cse_sc006320.1_g010.1 4 ENRNCDFCNESVAILYCRADTAKLCLSCDREVHSTnplfikHTRS 48 789******************************768888888875 PP
2	zf-B_box	22.2	2.9e-07	49	92	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvpl 42 C+ +++ ++++fC+++++ C++C e H+ H+++pl Cse_sc006320.1_g010.1 49 LLCDGCNSSPASIFCFTDSVVNCQNCDWECHQKslengHDRRPL 92 57**************************9997688888998875 PP
3	CCT	60.3	6.3e-21	318	360	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Re al+RYkeK+ktR+++K+irYesRK++AesR R++GrF+k Cse_sc006320.1_g010.1 318 RETALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIRGRFAKM 360 99***************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MPKENRNCDF CNESVAILYC RADTAKLCLS CDREVHSTNP LFIKHTRSLL CDGCNSSPAS 60 IFCFTDSVVN CQNCDWECHQ KSLENGHDRR PLEGFSGCPS VNDLLGIWGF EDLGKNGSGS 120 GRGGSGGETG GGFEDYLVWE TPGFVSLDDL IVSSGEDHGF QAMGVPPLPK NRNAAFGTYK 180 DELLRQLREL AKSEPQVVDG QDVVKPMKEF LPVVTTQSRL EGKSFGFEHK LEQNVYSPYE 240 ENTFQWCPDS CDTEGHEFHL DQIVGHNTEG NCIVPDEKFD NIHSSSHANA NHEGQSHHTV 300 GENVQAFPIV REINTQERET ALSRYKEKKK TRRYDKHIRY ESRKVRAESR TRIRGRFAKM 360 DR

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MPKENRNCDF CNESVAILYC RADTAKLCLS CDREVHSTNP LFIKHTRSLL CDGCNSSPAS  60
IFCFTDSVVN CQNCDWECHQ KSLENGHDRR PLEGFSGCPS VNDLLGIWGF EDLGKNGSGS  120
GRGGSGGETG GGFEDYLVWE TPGFVSLDDL IVSSGEDHGF QAMGVPPLPK NRNAAFGTYK  180
DELLRQLREL AKSEPQVVDG QDVVKPMKEF LPVVTTQSRL EGKSFGFEHK LEQNVYSPYE  240
ENTFQWCPDS CDTEGHEFHL DQIVGHNTEG NCIVPDEKFD NIHSSSHANA NHEGQSHHTV  300
GENVQAFPIV REINTQERET ALSRYKEKKK TRRYDKHIRY ESRKVRAESR TRIRGRFAKM  360
DR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	2e-94	CO-like family protein