PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006302.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 331aa MW: 37263 Da PI: 8.915

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006302.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58	3e-18	108	202	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +rks++k+ r+g i+++ +vC++eg++++ + + +k+ rt++ tgCka+ +++ + + k+++t+++ Cse_sc006302.1_g030.1 108 MYMRYASEAGFGIRKSTQKRL-RDGFIKEKYLVCNMEGSPKKIHVNtlapkkGDKQVRTSNFRITGCKARAILHMIHgTRKYKLTTFD 194 8*************99998.9999***********99988899987788888999999*********9****** PP FAR1 83 leHnHela 90 eHnHel Cse_sc006302.1_g030.1 195 VEHNHELD 202 ****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEIFDLNEPP IFVGEDFVDN SIDLTIVSVA VVSYLRRRVV VLVLIGLKKS DSVVIDSASS 60 SLKTPKSFIH HDFIDTPGGS VFWVPRVPAS VLPVLFSVYD SVEDCISMYM RYASEAGFGI 120 RKSTQKRLRD GFIKEKYLVC NMEGSPKKIH VNTLAPKKGD KQVRTSNFRI TGCKARAILH 180 MIHGTRKYKL TTFDVEHNHE LDRVEYKHLS KSDRKLTYTE QLFIIKSSNY NFGATKAHNL 240 YTGLKGSSTL VHGTEIEFRN LVRALLTPLA IELHASRVYT HKLFVLVQKE IIAGSWLCSI 300 KSKSCDEGCD IFEEKPDADI VPKLVDGEST S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	5e-07	FAR1 family protein