PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006248.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 316aa MW: 36168.7 Da PI: 9.0089

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006248.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +lv +++++G g+W++ + + g+ R++k+c++rw +yl Cse_sc006248.1_g060.1 13 KGPWTSEEDRKLVAYIEEHGHGSWRALPLKAGLQRCGKSCRLRWTNYL 60 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.9e-17	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia++++ +Rt++++k++w+++l Cse_sc006248.1_g060.1 66 RGKFSSQEEQTIIQLHALLGNR-WSAIASHLP-KRTDNEIKNYWNTHL 111 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MGRSPSFVKG LKKGPWTSEE DRKLVAYIEE HGHGSWRALP LKAGLQRCGK SCRLRWTNYL 60 RPDIKRGKFS SQEEQTIIQL HALLGNRWSA IASHLPKRTD NEIKNYWNTH LKKRLTKMGI 120 DPITHKSKTA VNTNVSHMTQ WENARLEAEA RLVRGSRVVS NFYQRIHNGS AHYINKSSLP 180 SLSVPQPLCF DVLKAWQGLT LSKLSNLNGL ETLNDQTMPI MNVLESVEPQ TFKDMSTEYH 240 MNEPSKDSFN TFDNPKEEAT QHTLEVGDMI YQDNYLGEAF TNHLVNDANS HGRFEDDSNY 300 WSNILDKLGN TSSSFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-89	MYB family protein