PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006248.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 280aa MW: 31966.9 Da PI: 7.7377

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006248.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.8	6.7e-15	29	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG + W++Ia++++ +Rt++++k+ w+++l Cse_sc006248.1_g020.1 29 RGKFSSQEEQTIIQLHALLGDR-WSAIASHLP-KRTDNEIKNSWNTHL 74 89****************99.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MVSVRSGLQR CGKSCRLRWT NYLRPDIKRG KFSSQEEQTI IQLHALLGDR WSAIASHLPK 60 RTDNEIKNSW NTHLKKRLTK MGIDPITHKS KTAINTNVSH MTQWENARLE AEARLVRGSR 120 VVSNFYQRIH NGPAHYINKS SPLPSLSVPQ PLCFDVLKAW QGLTLSKLSN LNGLDTLNDQ 180 TMPIMNVLES VEPQTLTDMS TEYHMNEPSK DSFNTFDNPK EEATQHTLEV GDMIYQDNYL 240 GEAFTNHLVN DANSHGRFED DSNYWSNILD KLGNTSSSFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-63	MYB family protein