PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006222.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 29126.1 Da PI: 5.3838 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l ++++G ++W I++ g+ R++k+c++rw +yl Cse_sc006222.1_g030.1 14 KGAWSEDEDDKLRGFIERYGHPNWCEIPNLAGLSRSGKSCRLRWMNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.6e-15 | 68 | 112 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T+eE++++vd +++ G++ W+ a+ ++ gR+++++k++w+++l Cse_sc006222.1_g030.1 68 GNFTKEEQDIIVDIHRKIGNK-WSMMAAQLP-GRSDNEIKNYWHTHL 112 89*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MVRAPRLDKF GMKKGAWSED EDDKLRGFIE RYGHPNWCEI PNLAGLSRSG KSCRLRWMNY 60 LRPNVKHGNF TKEEQDIIVD IHRKIGNKWS MMAAQLPGRS DNEIKNYWHT HLKNRVNRES 120 TIMRNEHTEI LEPSQACVEG CSIKMSNIKT TQDEVMILLA VLSSQSPSSF STSEMSSCSL 180 SISDYVVSSD VTPQFSNIAA SCWTEPLLLD DEIILSSSEK ILSPLGSTNN LICEASFQDI 240 IMEDVPLWST IDSYSLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16490.1 | 5e-50 | MYB family protein |