PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006159.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | G2-like | ||||||||
Protein Properties | Length: 258aa MW: 29533.4 Da PI: 10.5552 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.6 | 2.2e-31 | 58 | 111 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt+eLH++Fv+av++LGG+++AtPk il++m+vk Lt++h+kSHLQ++R+ Cse_sc006159.1_g020.1 58 PRLRWTNELHQCFVNAVQRLGGENRATPKMILQMMNVKTLTVSHIKSHLQMFRS 111 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.8e-17 | 59 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e+++ +v+av++lGg+ t+k I ++m+ k++t ++ks++q+++ Cse_sc006159.1_g020.1 59 RLRWTNELHQCFVNAVQRLGGEnraTPKMILQMMNvKTLTVSHIKSHLQMFR 110 89***********************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MKRLKGESSQ KELQSFFGSM GHSSEGSSRV SRRRRYNCLH ENISRKLMVR SYNRSRAPRL 60 RWTNELHQCF VNAVQRLGGE NRATPKMILQ MMNVKTLTVS HIKSHLQMFR SMKNEVILQE 120 ASKIEQAESC NDNHRGLVNV QDETRERNKH TSFSTSEMNR VEMKWNNTKL KEEGLSSVLD 180 SENLRTTFLR KMELPFAGDK VLYRHFLNNG STSNVSEDTA NAQEPIAVSF SSSTAVDIEL 240 TLGGPYAALR SSCANRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 4e-29 | G2-like family protein |