PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006107.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 345aa MW: 39439.2 Da PI: 5.2866

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006107.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	114	158	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd llv++vk++G ++W++Ia++++ + +kqc++rw++yl Cse_sc006107.1_g020.1 114 QWTEEEDMLLVRLVKLFGDKNWARIAARFP-QKIRKQCRDRWLNYL 158 6***************************.9**********97 PP
2	Myb_DNA-binding	64.2	2.5e-20	166	209	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd+ll+ ++k++G++ W++Ia++m+ gRt++++k++w++ + Cse_sc006107.1_g020.1 166 AWSEEEDKLLIALHKEFGNK-WTKIAKCMP-GRTENSIKNHWNNTK 209 7*****************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MSSFSFMESP SSHFYSNFPN FVASQDFVFG EPTQSNDTVY PCQASLTQTH SPFESTDFLE 60 PPILQSNVTQ MAPSPLVNSV EAVACLGTGE NRDNVQIKSG VSNGLWEKET LSRQWTEEED 120 MLLVRLVKLF GDKNWARIAA RFPQKIRKQC RDRWLNYLSP NIIKIAWSEE EDKLLIALHK 180 EFGNKWTKIA KCMPGRTENS IKNHWNNTKR KILRSINGRK KTEDYHSVLT DYITSVTSSS 240 SSSKRQTDIQ PSPLKQAESS AFDPLKDQRV MSLNISSSFS TCCGVGYKPD ELVVKKADFD 300 FDFDLEFGDI DINFDDVASH STEQLEFDQK NDTFFMDMVN FNIKF

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MSSFSFMESP SSHFYSNFPN FVASQDFVFG EPTQSNDTVY PCQASLTQTH SPFESTDFLE  60
PPILQSNVTQ MAPSPLVNSV EAVACLGTGE NRDNVQIKSG VSNGLWEKET LSRQWTEEED  120
MLLVRLVKLF GDKNWARIAA RFPQKIRKQC RDRWLNYLSP NIIKIAWSEE EDKLLIALHK  180
EFGNKWTKIA KCMPGRTENS IKNHWNNTKR KILRSINGRK KTEDYHSVLT DYITSVTSSS  240
SSSKRQTDIQ PSPLKQAESS AFDPLKDQRV MSLNISSSFS TCCGVGYKPD ELVVKKADFD  300
FDFDLEFGDI DINFDDVASH STEQLEFDQK NDTFFMDMVN FNIKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-39	MYB family protein