PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006079.1_g100.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 356aa MW: 40815 Da PI: 6.6522

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006079.1_g100.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.8	2.6e-18	154	200	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd l+++v+++Gg+ W+ Ia+++ gR +kqc++rw+++l Cse_sc006079.1_g100.1 154 KGQWTKEEDRVLKQLVEKHGGRKWSYIAQMLK-GRIGKQCRERWHNHL 200 799**************************9.***********97 PP
2	Myb_DNA-binding	51.1	3e-16	207	248	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + WT+eEd +l+ +++ G++ W+ Ia++++ gRt++++k++w+ Cse_sc006079.1_g100.1 207 DFWTEEEDRILITTHAEVGNK-WSEIAKKLP-GRTENSIKNHWN 248 67*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEFQTIFKDD PSIFLSSQYL KPEPDAQTED DYPIHDLHVL ENFSSMGPSF HPDYGMPVSE 60 YDPFGPFSYG SGDLEFKPFE VENGCEMMHE YTGSGSFAGV SELDHIVHGD LTQKTKPVGF 120 LAPDEGSCVT GENAGIKKVT GTSCKRNTKT HSSKGQWTKE EDRVLKQLVE KHGGRKWSYI 180 AQMLKGRIGK QCRERWHNHL RPDIKKDFWT EEEDRILITT HAEVGNKWSE IAKKLPGRTE 240 NSIKNHWNAT KRRQYTKRKC RSKWPKPSPI LQNYIKSLNL PRGKSSVNKN KLVKLSSSSL 300 NQYGFDLSDR LVPDFDFNEL PEFALDEKLL EDDSIGSLLD KEKQLDLMEM ISQVDF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEFQTIFKDD PSIFLSSQYL KPEPDAQTED DYPIHDLHVL ENFSSMGPSF HPDYGMPVSE  60
YDPFGPFSYG SGDLEFKPFE VENGCEMMHE YTGSGSFAGV SELDHIVHGD LTQKTKPVGF  120
LAPDEGSCVT GENAGIKKVT GTSCKRNTKT HSSKGQWTKE EDRVLKQLVE KHGGRKWSYI  180
AQMLKGRIGK QCRERWHNHL RPDIKKDFWT EEEDRILITT HAEVGNKWSE IAKKLPGRTE  240
NSIKNHWNAT KRRQYTKRKC RSKWPKPSPI LQNYIKSLNL PRGKSSVNKN KLVKLSSSSL  300
NQYGFDLSDR LVPDFDFNEL PEFALDEKLL EDDSIGSLLD KEKQLDLMEM ISQVDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	3e-79	MYB family protein