PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005988.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Dof | ||||||||
Protein Properties | Length: 252aa MW: 28816.3 Da PI: 4.9033 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 107.7 | 5.8e-34 | 24 | 80 | 3 | 60 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + +kcprC s+ntkfCyynny +qPryfCkaC+ryWtk G+lrnvP+Gg rknk+ Cse_sc005988.1_g020.1 24 PDLVKCPRCGSKNTKFCYYNNYKKTQPRYFCKACKRYWTKDGTLRNVPIGGD-RKNKR 80 5679*********************************************986.55554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSDSEGLEFP KPPSSRKQPQ IQQPDLVKCP RCGSKNTKFC YYNNYKKTQP RYFCKACKRY 60 WTKDGTLRNV PIGGDRKNKR LRLPIIKTTT TMAIRNNLSR DQDSLSPKLS GPNEVYDASN 120 KTSFFEPTCS EWRVDVESYI DMEEFNGLIS WDVDGSFIGC TMQDFAHEDL PKVGLSKPLS 180 SFETSQCSNI PRSFIEMLEN DEDSTITTSS MLSPNCQQTS NILELSSWDC NDLDTLALED 240 MNKPWEDPTF KT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 2e-28 | Dof family protein |