PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005728.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 224aa MW: 25380 Da PI: 9.1192

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005728.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.5	3.3e-11	48	123	6	90
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y+k++GF+v k sk+ v s++ + +++ +ek++r+r + r+gC ak++++k + + +ev+ +++ HnH+l+ Cse_sc005728.1_g030.1 48 YGKRAGFDVGKGVVDGSKN---------VVSEHSDITMDENVKEKKKRNRGSFRCGCLAKIRIRKIEGNFYEVYAFVEGHNHPLV 123 6666666666665555511.........11222222223333468899***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MPDPQPVEWH VQAVRVKDHV GFYTCDDKGN RTWFPDIDIG DKPVKVDYGK RAGFDVGKGV 60 VDGSKNVVSE HSDITMDENV KEKKKRNRGS FRCGCLAKIR IRKIEGNFYE VYAFVEGHNH 120 PLVAEKDMIF MKSSKDLTYT KQHFLFQASN ANFGPFTGFK LLEQMCGGFD KVGATVVDCK 180 NQKKKINLFI GDRDAQMAVE NLLSKKLHTP GFYVKYKTGD EANV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-10	FAR1 family protein