PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005712.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 328aa    MW: 38182.5 Da    PI: 6.8497
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005712.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1225.5e-074792147
                   FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                           ++Y eY+++  F++rks+ k++ +++eit+r   C++ gkr+++ + 
  Cse_sc005712.1_g040.1 47 DMYLEYSQKGRFNIRKSNIKRN-NKREITHRSILCNRAGKRRSKVEV 92
                           58***************99998.7777**************998664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
EYDIDIYEGD PEFVPTPKGT PYWAPDIPED EKPKRGVIFD TFDLAYDMYL EYSQKGRFNI  60
RKSNIKRNNK REITHRSILC NRAGKRRSKV EVNTLKEGEE EEEAYKVIDF VENHNHPLMN  120
ENNMDLSRAR RQLQFGDYVF IHRASLSNVG PTKAHRLKVA LMGGYDKVRG TPMDWRNFRR  180
AVNSFVGDRD AQMLVDKMIN RINHVPEFSF EYHIDTEGEL VSFFWADETM KCNYVAFGDV  240
VSFDATFRTN KYNFVFVPFT GIDHHQKCVT FGAALLCDET YESYCWMLEA FLKVHIKQPP  300
LALTDQDAAL KKVVVKIFPS LIIGCVRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-33FAR1 family protein