PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005699.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 319aa    MW: 35797.1 Da    PI: 5.0803
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005699.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-102232631055
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  Cse_sc005699.1_g010.1 223 RKRRERINERLRILQKLVPNG-----TKVDISTMLEEAVQYVKFLQ 263
                            9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MESVSTLLGE WNSCGVNVSE EAFFMSQLLE NFPCSNDLET NLPFEVPSTF WQHHELSMSV  60
DEADETSVYL SHNTISNPHC LSQDHNSSDG SSLLFSNSSG ARYPLIDCLR EGSDNLVPKQ  120
IKNIKSFASS RKRSASMSDV HENKETINCR KIQKLVSEIN EDEAECKVSF GQTMRVYASD  180
NDSNWSHESS ISPRPKEAPI PNSNGMTKAS RVSATDPQSV YARKRRERIN ERLRILQKLV  240
PNGTKVDIST MLEEAVQYVK FLQLQIKLLS SDDMWMYAPI AYNGMNIGLD FIVNQLGTQN  300
GQNLNILCHE LSCSAQLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-40bHLH family protein