PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005536.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 283aa    MW: 31971 Da    PI: 6.7628
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005536.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.61.8e-26103150552
                 RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            +s e++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  Cse_sc005536.1_g080.1 103 LSRETISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 150
                            7899*****************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MTYTDDFMSV YGINNGFSFQ NQDMSIVNST FGLLDQNGPL MLAYTEDTNA GENMNSQMRN  60
HNEEMKIDNA KSERDAANSR NIRKLEKGRG DHNGSSYTSK LLLSRETISQ YFYMPITQAA  120
KELNVGLTLL KKRCRELGIR RWPHRKLMSL QTLINNVQQE LGKSSGAQAD EKMREAVMIL  180
EQERKKMEEI PDLQLERNTK RLRQACFKAN YKKRRTMGVV ASSANSTSIN GSQPSLSSCS  240
STCSINPVGY EVVDDDCGDD EEQEVMKSML FSDCLASSNN SIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-52Nin-like family protein