PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005516.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 339aa MW: 37835.2 Da PI: 6.8622

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005516.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	91.3	2.1e-28	50	135	2	66
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................s 66 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WL+ k i++l+ + Cse_sc005516.1_g020.1 50 FGGKDRHSKVCTVKGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVIDWLIDSTKDDIDQLPPLqmlpgdfnqfhpvpsplipqdL 135 689***********************************************************996666666655555444444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MFNNSSGGKD FPAKQEGDIN EATIPRTHTS TSRQWAGFKN PRIVRVSKAF GGKDRHSKVC 60 TVKGLRDRRI RLSVPTAIQL YDLQDRLGLN QPSKVIDWLI DSTKDDIDQL PPLQMLPGDF 120 NQFHPVPSPL IPQDLNSPQI SFSQFLSTPN ATFVKDVGNR TLLYTKQGIK LDNDHGINQD 180 HQRMKGKEAL VENNEQENGD GNGGLNFFPI PQYSYPGLFP YNPYYNWEPS SNLSISQFGN 240 QGLASSHTDS SMALPSASQL FLCPTATITP SPYPPYLMPN LGENHDLVRQ NNHFNLLSSS 300 SSQPPNSLMP LLNLSDSQQK VPFDFTTHPK DRSHDNEGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-45	TCP family protein