PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005507.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 354aa MW: 39523.3 Da PI: 6.1936

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005507.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.4e-14	171	217	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr++lP+ +K +Ka+ L ++++++k+L Cse_sc005507.1_g010.1 171 KSHSEAERRRRERINNHLAKLRSILPST-----TKTDKASLLAEVIQHLKEL 217 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MCSKREEQEL VEEQQLQEEG DHHQELPSLI IPQTQHQNMG IVDYSYTSSS EVSPILHPQQ 60 PPWIIPQVFN HHNTACTDLP FTDHGNYIFP PPPPPSSLTS TYGGLVNRRV PSGLQFAYEG 120 STSSSDHHLR LISETLGQMV QPGSMPFGLQ AEMGKMTAQE IMDAKALAAS KSHSEAERRR 180 RERINNHLAK LRSILPSTTK TDKASLLAEV IQHLKELKRQ TSIIAEQSPV PTETDELIID 240 NTSDEDGNLV IRASLCCEDR SDLLPDLIKT LKALHLRTLK AEITTLGGRV KNVLFITGDQ 300 DPNNNDSTTN YSINMIQEAF KAVMEKTNGD HESTSGSAKR QRTNSIHVVD HRRT

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MCSKREEQEL VEEQQLQEEG DHHQELPSLI IPQTQHQNMG IVDYSYTSSS EVSPILHPQQ  60
PPWIIPQVFN HHNTACTDLP FTDHGNYIFP PPPPPSSLTS TYGGLVNRRV PSGLQFAYEG  120
STSSSDHHLR LISETLGQMV QPGSMPFGLQ AEMGKMTAQE IMDAKALAAS KSHSEAERRR  180
RERINNHLAK LRSILPSTTK TDKASLLAEV IQHLKELKRQ TSIIAEQSPV PTETDELIID  240
NTSDEDGNLV IRASLCCEDR SDLLPDLIKT LKALHLRTLK AEITTLGGRV KNVLFITGDQ  300
DPNNNDSTTN YSINMIQEAF KAVMEKTNGD HESTSGSAKR QRTNSIHVVD HRRT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	182	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-99	bHLH family protein