PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005492.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 295aa MW: 31070.9 Da PI: 5.7391

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005492.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.3	7.5e-10	144	188	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L Cse_sc005492.1_g030.1 144 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 188 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MANSNPSDGS ADDFFEQILG FPFAGGVGGG GSSNDPNMAG NDQGHVMAGA GVANNPRMLQ 60 LNSGIGVGGG GVGGAGGYHF PLGLSLDASG SGKRFREDVV DSRVSANSGF QGQPMPNTVQ 120 TAPNPPAVRP TRVRARRGQA TDPHSIAERL RRERIAERIR ALQELVPSVN KTDRAAMLDE 180 IVDYVKFLRL QVKVLSMSRL GGASAVAPLV TDIPISSVED EGGEGGRNQP AWEKWSNDGT 240 ERQVAKLMEE NVGAAMQFLQ SKALCIMPIS LASAIYHTQP PDSTSLIKPE SEPPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	154	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	6e-96	bHLH family protein