PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005442.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 401aa MW: 44069.3 Da PI: 5.3922

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005442.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.5	9.4e-16	223	277	3	60
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 ++kr +r+ +NRe+ArrsR+RK+a + Le+ v++L +e ++L k+l + +++ k Cse_sc005442.1_g030.1 223 DVKRIKRMVSNRESARRSRKRKQAHLTDLEQQVEQLRGEYSTLFKQLTNASQQ---FK 277 68******************************************665555554...44 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MNNNYNSNKK EDEPFEYDIE ELLKNSIAPD FHHHPSVAAG GGGGLFDGVG FDRKCYAGGD 60 LPLPYSNSED EQFNVRASFD YDIEELLKHS IGPDFDHHRN HHNPSAAAGG GLFDSVGFDR 120 KCYAGGDLPL PYTNSDNVNR FSNCGGMAAN PLWSQNLTQK NSSVTMTMDS QSSICADSPT 180 SDTKPKVRRD SNVIGATSDD EQSDDDDTEI EAGQCEQSND QMDVKRIKRM VSNRESARRS 240 RKRKQAHLTD LEQQVEQLRG EYSTLFKQLT NASQQFKDAS TNNRVLKSDV EALRAKVKLA 300 EDMVTRGSLT SSLSHLIQNH LTTPPMFNSQ NMSRMGNVCP TITVRGDDHG SHPGLSVPGQ 360 HVMVGLGTNP DIFNGNVKNG ISSDAGSCVS DIWPLDSHRN V

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MNNNYNSNKK EDEPFEYDIE ELLKNSIAPD FHHHPSVAAG GGGGLFDGVG FDRKCYAGGD  60
LPLPYSNSED EQFNVRASFD YDIEELLKHS IGPDFDHHRN HHNPSAAAGG GLFDSVGFDR  120
KCYAGGDLPL PYTNSDNVNR FSNCGGMAAN PLWSQNLTQK NSSVTMTMDS QSSICADSPT  180
SDTKPKVRRD SNVIGATSDD EQSDDDDTEI EAGQCEQSND QMDVKRIKRM VSNRESARRS  240
RKRKQAHLTD LEQQVEQLRG EYSTLFKQLT NASQQFKDAS TNNRVLKSDV EALRAKVKLA  300
EDMVTRGSLT SSLSHLIQNH LTTPPMFNSQ NMSRMGNVCP TITVRGDDHG SHPGLSVPGQ  360
HVMVGLGTNP DIFNGNVKNG ISSDAGSCVS DIWPLDSHRN V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	244	RRSRKRK
2	238	245	RRSRKRKQ
3	240	245	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	5e-67	bZIP family protein