PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005400.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 742aa MW: 84600.6 Da PI: 8.3957

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005400.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.4	3.1e-15	71	199	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......................................te 49 +fY++Y+k GF+++ ++++++ ++ + f C++ gk++++ + ++ Cse_sc005400.1_g030.1 71 NFYRHYSKIGGFDIKLGTESNHDGSDCPSIKYFSCNRGGKKRDSMYDrhrsdsdvvvrgrvngkgvdvaiddkgkgidlslvgdsfAK 158 6****************999999999999*******9998899********************************999 PP FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+ r++++ +tgC a+l+v+k + +ev+ +++eHnH+l+ Cse_sc005400.1_g030.1 159 KKFRKNTSCKTGCLAQLRVRKVDGVMYEVYVFVEEHNHPLV 199 999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MIHSDINCIY VNDYLLAAVF SSSVSNVSNV VDRSIGVSSV INGSRVWVPD VDMSLKPTKG 60 TVFVSLVQAY NFYRHYSKIG GFDIKLGTES NHDGSDCPSI KYFSCNRGGK KRDSMYDRHR 120 SDSDVVVRGR VNGKGVDVAI DDKGKGIDLS LVGDSFAKKK FRKNTSCKTG CLAQLRVRKV 180 DGVMYEVYVF VEEHNHPLVS KEDMQFLMSS RDMGCSKQHF LMQVSNSNVG PVRAFRLMKE 240 IYGGFENIGA TVVDCKNFKR DVSTFIGDRD GQMVVEKLEN LEKHCEGFFV DYYKGEGDSL 300 SALFWADSCA KMNYRMVFVL FTSIDNHNRS VAFGVGLLAD KTIASYMLVL QFAITLTLGN 360 DCVMSFGMIR FRQFGLSENK WLSDIYDMRS RWIPAFLRDE DLSGLMRTTS RSESENHFFG 420 RWTNSNLTLV EFISHFDSAM DSQRYSQRKN DQESRYKKPD LRTGLKLEKD AAEIYTLNVF 480 FDIQEEISAS VTHCLSVSTQ QIGVFEKYFI RDTGVKKWND KTSFEVFEVL FCSSDMSVTC 540 SCKRFDLLGL LCRHIFYVLR LNGIEDFPRE YVLDRWCKTP DDVCLDAFVN AADSSSDAVI 600 HSIRRIVEDT VGRLMPCREK LDVYRLKLSE LLSRAESDVP VGLKKSKSDT FCSMFGVREP 660 EGVVIKVPKQ SKNKRTGIHT RWKNIDEIIR KESEAGKKRR VCFTCGKPEG RNSRTCPYKD 720 MIMAGNKREC RSTRAMDVNY QE

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MIHSDINCIY VNDYLLAAVF SSSVSNVSNV VDRSIGVSSV INGSRVWVPD VDMSLKPTKG  60
TVFVSLVQAY NFYRHYSKIG GFDIKLGTES NHDGSDCPSI KYFSCNRGGK KRDSMYDRHR  120
SDSDVVVRGR VNGKGVDVAI DDKGKGIDLS LVGDSFAKKK FRKNTSCKTG CLAQLRVRKV  180
DGVMYEVYVF VEEHNHPLVS KEDMQFLMSS RDMGCSKQHF LMQVSNSNVG PVRAFRLMKE  240
IYGGFENIGA TVVDCKNFKR DVSTFIGDRD GQMVVEKLEN LEKHCEGFFV DYYKGEGDSL  300
SALFWADSCA KMNYRMVFVL FTSIDNHNRS VAFGVGLLAD KTIASYMLVL QFAITLTLGN  360
DCVMSFGMIR FRQFGLSENK WLSDIYDMRS RWIPAFLRDE DLSGLMRTTS RSESENHFFG  420
RWTNSNLTLV EFISHFDSAM DSQRYSQRKN DQESRYKKPD LRTGLKLEKD AAEIYTLNVF  480
FDIQEEISAS VTHCLSVSTQ QIGVFEKYFI RDTGVKKWND KTSFEVFEVL FCSSDMSVTC  540
SCKRFDLLGL LCRHIFYVLR LNGIEDFPRE YVLDRWCKTP DDVCLDAFVN AADSSSDAVI  600
HSIRRIVEDT VGRLMPCREK LDVYRLKLSE LLSRAESDVP VGLKKSKSDT FCSMFGVREP  660
EGVVIKVPKQ SKNKRTGIHT RWKNIDEIIR KESEAGKKRR VCFTCGKPEG RNSRTCPYKD  720
MIMAGNKREC RSTRAMDVNY QE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-46	FAR1 family protein