PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005302.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 334aa    MW: 36706.3 Da    PI: 4.8419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005302.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19109158255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ +++++g
  Cse_sc005302.1_g010.1 109 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDEEARRIRG 158
                            69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MCGGAIISDF IAPTNKSSRR LTADDLFPQN GFFKPSRSCY SKPLRSEIFD DGEEDFEADF  60
AGFKDDEFLS AAVVKGSVKP RGSKSSKSSA VKTDDTQAEK STTRKRKNQY RGIRQRPWGK  120
WAAEIRDPRK GVRVWLGTFN TAEEAARAYD EEARRIRGSK AKVNFPDEGK STPQKELPKA  180
NPTLNQNTDA SLGYFEQKPQ VNPAANMGVN SFSPLDNTAV FHFNSDQGSN SFGCSDFGWG  240
DHCATTPEIT SVFSEVDDVS FMENANPAKK LKPDSVNTGS ASGDESLFQM PYFETSWDTS  300
SVEAFLNGDA NQAGGNEVDL WSFSDLPAMM NGSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.37e-60ERF family protein