PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005261.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 266aa    MW: 29058.1 Da    PI: 6.9674
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005261.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.67.6e-10753245
                           SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45
                           g WT e d  + da   +  +    +W++Ia  ++ g+t++++k+++ 
  Cse_sc005261.1_g040.1  7 GVWTREQDRAFEDALIAHFEEdskdCWDKIAIDVP-GKTAEEIKHHYE 53
                           68****************9999*************.**********96 PP
2Myb_DNA-binding44.63.2e-14116160347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT++E+ l++ + +++G+g+W++I+r +  +Rt+ q+ s+ qky
  Cse_sc005261.1_g040.1 116 AWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKY 160
                            7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MMADKIGVWT REQDRAFEDA LIAHFEEDSK DCWDKIAIDV PGKTAEEIKH HYELLVDDLD  60
RIESGIVPLP CYTASSDDSG SHGGEDGSSK KSGTSRHHSS EGKASKADQE RRKGVAWTED  120
EHRLFLLGLE KYGKGDWRSI SRNFVVTRTP TQVASHAQKY FIRQNSMNRD RRRTSIHDIT  180
SVNNGDTSSP ITGQTNASPA GKSSNQPPHA TSDGGTTVGL PLAVGTPVNI TPQSHMAYGI  240
IAPGHLGPMT YPGPMAYPTS NTSSRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-87MYB family protein